698 tools
All

Allele Frequency Calculator

Calculate the frequencies of alleles A and a from the numbers of AA, Aa, and aa individuals in a diploid population.

 

 

 

Individuals (N)
Frequency p (A)
Frequency q (a)

About this calculator

Use this calculator to determine allele frequencies at a single genetic locus when you know the numbers of individuals with genotypes AA, Aa, and aa.

This calculator assumes a diploid population with two possible alleles at the locus: A and a. Each individual carries two copies of the locus, so the population has 2N total alleles, where N is the number of individuals.

The frequency of allele A (p) is calculated as (2 × AA + Aa) / (2 × N). Each AA individual contributes two A alleles, while each Aa individual contributes one A allele. The frequency of allele a (q) is calculated as (2 × aa + Aa) / (2 × N).

Because only A and a are considered, p + q = 1. Allele frequencies range from 0 to 1 and can also be expressed as percentages by multiplying them by 100.

AA count: Number of individuals with genotype AA. Each contributes two copies of allele A.

Aa count: Number of individuals with genotype Aa. Each contributes one copy of allele A and one copy of allele a.

aa count: Number of individuals with genotype aa. Each contributes two copies of allele a.

Individuals (N): Total number of individuals in the population, calculated as AA + Aa + aa.

Frequency p (A): Frequency of allele A among all copies of the locus in the population.

Frequency q (a): Frequency of allele a among all copies of the locus in the population.